Backing up mongodb database is fairly simple. If you have a mongodb user associated with the database, you can use the following command to make a backup.
/path/to/mongodump -d your_db --username db_user -p -o /your/backup/path/mongodb/your_db-mongodump
To backup MongoDB database using the gzip option:
mongodump --db your_db_name --gzip -o /your/backup/path/
To Restore the database when using gzip option:
mongorestore --gzip --db your_db_name /your/backup/path